Dataset summary
| TF Name: | LFY | Species: | Arabidopsis thaliana |
| Cell-type/Tissue: | inflorescence | Condition/Source: | treatment with a solution containing 10 μM dexamethasone (Sigma-Aldrich), 0.01% (v/v) ethanol, and 0.015% (v/v) Silwet L-77 (De Sangosse). |
| JASPAR ID: | MA0590.1 | Collections: | Permissive Robust |
| References: | GEO GSE96806 GSM2544348 GTRD EXP041523 PUBMED 28385730 | ||
External links
Statistical details
| Model | Peak caller | Model ID | Enrichment Zone | TFBSs | Score threshold | Centrality p-value (log10) |
|---|---|---|---|---|---|---|
| DAMO | MACS | MA0590.1 | 27 | 306 | 87.1 | -102.789065190842 |
8 datasets found for the same TF (LFY) in other cell-types/tissues
| TF Name | Cell-line | Condition/Source | Collections | Species | Identifiers | JASPAR ID |
|---|---|---|---|---|---|---|
| LFY | complete 15 day-old seedlings | wild type (Col-0) | Permissive | Arabidopsis thaliana | GSE24568 ... | MA0590.1 |
| LFY | complete 15 day-old seedlings | wild type (Col-0) | Permissive | Arabidopsis thaliana | GSE24568 ... | MA0590.1 |
| LFY | complete 15 day-old seedlings | plants that overexpressed LFY (35S:LFY) | Permissive Robust | Arabidopsis thaliana | GSE24568 ... | MA0590.1 |
| LFY | complete 15 day-old seedlings | plants that overexpressed LFY (35S:LFY) | Permissive Robust | Arabidopsis thaliana | GSE24568 ... | MA0590.1 |
| LFY | 7 days old seedlings | spl7 mutant | Permissive | Arabidopsis thaliana | GSE45213 ... | MA0590.1 |
| LFY | complete 15 day-old seedlings | p35S:LFY; CA26-15 strain | Permissive Robust | Arabidopsis thaliana | GSE64245 ... | MA0590.1 |
| LFY | complete 15 day-old seedlings | p35S:LFYTERE; CA29-17 strain | Permissive Robust | Arabidopsis thaliana | GSE64245 ... | MA0590.1 |
| LFY | complete 15 day-old seedlings | Permissive | Arabidopsis thaliana | GSE64245 ... | MA0590.1 |